This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001133.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR352EIC |
| Model: | BPNet |
| A [ | -2.86e-03 | -2.43e-03 | -9.29e-04 | -1.18e-03 | 2.21e-03 | -7.31e-04 | -3.25e-04 | -2.09e-03 | 2.36e-02 | -1.67e-03 | -5.87e-03 | -7.13e-04 | -2.21e-03 | -4.53e-03 | -2.55e-03 | 1.01e-02 | 1.82e-03 | 4.58e-03 | 1.62e-03 | -7.81e-04 | -1.22e-03 | 3.09e-04 | -3.01e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 3.34e-02 | 2.97e-04 | 7.79e-02 | 1.37e-01 | 5.49e-02 | 9.15e-02 | 1.82e-01 | 1.82e-03 | -1.70e-03 | 1.19e-02 | 3.82e-03 | -2.92e-04 | -1.66e-03 | 1.56e-02 | 8.47e-03 | -2.41e-03 | -1.70e-04 | -1.70e-03 | -7.45e-04 | -1.14e-03 | -1.09e-03 | -1.65e-03 | -3.08e-03 | ] |
| G [ | 1.15e-03 | 5.29e-02 | 1.49e-03 | -4.42e-04 | -4.64e-04 | -2.13e-04 | -7.20e-05 | -2.90e-04 | 1.68e-02 | 6.37e-02 | -1.06e-05 | 1.83e-01 | 1.16e-01 | -2.82e-03 | 6.95e-03 | 1.45e-02 | 3.64e-03 | -2.88e-04 | 5.62e-04 | 3.18e-03 | 7.14e-03 | 1.34e-02 | 3.15e-02 | ] |
| T [ | 4.21e-03 | -1.11e-03 | -1.89e-03 | -1.62e-03 | -4.43e-03 | 7.89e-03 | -3.40e-04 | 8.22e-02 | -3.92e-03 | -1.32e-03 | 3.38e-02 | -8.72e-04 | -1.26e-03 | 8.20e-03 | -4.28e-03 | -4.73e-03 | -1.63e-03 | 1.77e-04 | 4.70e-04 | 1.09e-03 | -5.27e-04 | -2.04e-03 | -2.33e-03 | ] |
| A [ | 5123 | 6389 | 5322 | 2152 | 15847 | 887 | 147 | 2947 | 20580 | 1374 | 8629 | 106 | 2399 | 9656 | 12125 | 21305 | 14273 | 17027 | 14609 | 12220 | 11796 | 14130 | 12863 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22298 | 4425 | 39201 | 48204 | 31019 | 36055 | 52758 | 4118 | 3118 | 17181 | 5376 | 55 | 2071 | 21988 | 18250 | 6781 | 12936 | 10371 | 11148 | 11824 | 11107 | 8409 | 7415 | ] |
| G [ | 6477 | 32129 | 4653 | 1358 | 2038 | 293 | 47 | 1008 | 21943 | 31505 | 2286 | 52432 | 44724 | 5617 | 11995 | 17888 | 14247 | 11968 | 13804 | 15025 | 16992 | 19455 | 23751 | ] |
| T [ | 19298 | 10253 | 4020 | 1483 | 4293 | 15962 | 245 | 45124 | 7557 | 3136 | 36906 | 604 | 4003 | 15936 | 10826 | 7223 | 11741 | 13832 | 13635 | 14129 | 13302 | 11202 | 9168 | ] |
