Detailed information of deep learning profile BP001136.1

This page shows detailed deep learning-derived predictions and motifs for HNF4G in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF4G
Model ID: BP001136.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0484.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14541  
Source: ENCSR793EHQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.42e-04 -7.15e-04 -1.33e-03 -2.27e-04 3.18e-02 2.81e-02 2.73e-02 -3.84e-05 -5.34e-04 -5.16e-04 -9.44e-05 1.28e-02 ]
C [ -2.95e-04 -7.51e-04 2.68e-03 3.41e-02 -2.09e-04 -1.87e-04 -1.14e-06 5.33e-06 -1.59e-04 7.51e-03 3.16e-02 -9.64e-04 ]
G [ 2.82e-02 2.42e-03 -1.92e-04 -2.19e-04 2.47e-04 -4.74e-04 4.21e-04 4.86e-02 5.92e-03 -6.72e-04 -2.45e-04 1.04e-03 ]
T [ -6.60e-04 2.86e-03 1.41e-03 9.76e-05 -1.34e-04 -2.20e-04 -9.66e-05 -2.16e-05 2.06e-02 6.24e-03 4.85e-04 -1.57e-03 ]

Frequency matrix

A [ 1921 3958 2849 345 16919 14416 15326 0 1304 1211 803 11568 ]
C [ 591 2049 5607 16552 570 512 122 0 530 8049 15015 2166 ]
G [ 14857 6790 4469 490 911 3234 2874 18688 6753 2637 611 2500 ]
T [ 1319 5891 5762 1301 288 526 366 0 10102 6790 2259 2454 ]

2 profiles found for the same TF (HNF4G) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000415.1 HNF4G ENCSR000BNJ HepG2 Homo sapiens
BP000526.1 HNF4G ENCSR297GII liver Homo sapiens
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