This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001140.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR601FEB |
| Model: | BPNet |
| A [ | -1.97e-03 | -6.50e-04 | 2.45e-02 | -1.43e-03 | -4.57e-03 | 7.15e-02 | -2.36e-04 | 1.52e-02 | -2.82e-03 | -5.77e-04 | -1.13e-03 | -2.74e-03 | 8.17e-03 | -2.50e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.26e-02 | 1.52e-01 | -6.00e-04 | 5.54e-02 | 1.39e-02 | -1.56e-04 | -4.50e-05 | -7.99e-05 | -2.59e-04 | -8.00e-05 | 1.71e-04 | 8.23e-02 | -6.65e-04 | 2.70e-02 | ] |
| G [ | -1.45e-03 | -2.49e-04 | 6.03e-03 | 9.45e-03 | -2.21e-03 | 3.15e-04 | 1.48e-01 | 6.40e-02 | 4.97e-02 | 1.49e-01 | 1.02e-01 | -4.27e-04 | 5.12e-02 | 9.96e-03 | ] |
| T [ | -2.44e-03 | -5.95e-04 | -4.59e-03 | -1.63e-03 | 1.74e-02 | -1.91e-03 | -2.26e-04 | -3.43e-04 | 5.62e-03 | -4.15e-04 | -3.23e-04 | -2.83e-03 | -2.50e-03 | -8.17e-04 | ] |
| A [ | 2962 | 562 | 23118 | 1851 | 5139 | 29463 | 182 | 12910 | 1831 | 431 | 909 | 4875 | 13652 | 3461 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 28016 | 34075 | 1507 | 20367 | 14484 | 1184 | 43 | 338 | 1459 | 171 | 1550 | 25900 | 1890 | 17079 | ] |
| G [ | 1961 | 144 | 5920 | 11778 | 2956 | 2540 | 34609 | 21315 | 20138 | 34058 | 29776 | 1328 | 17663 | 11039 | ] |
| T [ | 1999 | 158 | 4393 | 943 | 12360 | 1753 | 105 | 376 | 11511 | 279 | 2705 | 2836 | 1734 | 3359 | ] |
