Detailed information of deep learning profile BP001141.1

This page shows detailed deep learning-derived predictions and motifs for REST in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP001141.1
Cell line/tissue: GM23338
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR871KYB
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.68e-04 -2.97e-04 -6.52e-04 -1.40e-05 -3.60e-05 1.05e-01 -5.43e-05 1.25e-01 5.45e-07 -1.62e-03 5.97e-04 -5.60e-04 -4.89e-04 ]
C [ 3.54e-03 2.45e-02 1.92e-03 2.53e-05 -2.37e-07 3.05e-04 1.10e-01 1.53e-05 5.40e-05 7.33e-02 8.12e-05 5.55e-02 5.86e-02 ]
G [ 3.30e-02 1.37e-03 -5.98e-04 1.46e-01 1.35e-01 1.00e-04 6.31e-05 4.77e-05 1.53e-01 -4.14e-04 2.12e-02 9.95e-04 -2.25e-04 ]
T [ -2.04e-03 8.23e-04 4.74e-02 1.16e-05 1.61e-04 3.63e-04 -7.75e-05 1.41e-04 -6.52e-06 2.99e-04 1.79e-02 -6.23e-04 3.72e-04 ]

Frequency matrix

A [ 494 1147 513 30 117 3986 24 4271 27 486 840 533 311 ]
C [ 2057 1449 536 18 7 179 3853 22 5 3110 100 2871 3311 ]
G [ 1222 716 412 4272 4185 36 347 11 4288 229 1590 720 128 ]
T [ 557 1018 2869 10 21 129 106 26 10 505 1800 206 580 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages