Detailed information of deep learning profile BP001141.1

This page shows detailed deep learning-derived predictions and motifs for REST in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP001141.1
Cell line/tissue: GM23338
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR871KYB
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.68e-04 -2.97e-04 -6.52e-04 -1.40e-05 -3.60e-05 1.05e-01 -5.43e-05 1.25e-01 5.45e-07 -1.62e-03 5.97e-04 -5.60e-04 -4.89e-04 ]
C [ 3.54e-03 2.45e-02 1.92e-03 2.53e-05 -2.37e-07 3.05e-04 1.10e-01 1.53e-05 5.40e-05 7.33e-02 8.12e-05 5.55e-02 5.86e-02 ]
G [ 3.30e-02 1.37e-03 -5.98e-04 1.46e-01 1.35e-01 1.00e-04 6.31e-05 4.77e-05 1.53e-01 -4.14e-04 2.12e-02 9.95e-04 -2.25e-04 ]
T [ -2.04e-03 8.23e-04 4.74e-02 1.16e-05 1.61e-04 3.63e-04 -7.75e-05 1.41e-04 -6.52e-06 2.99e-04 1.79e-02 -6.23e-04 3.72e-04 ]

Frequency matrix

A [ 494 1147 513 30 117 3986 24 4271 27 486 840 533 311 ]
C [ 2057 1449 536 18 7 179 3853 22 5 3110 100 2871 3311 ]
G [ 1222 716 412 4272 4185 36 347 11 4288 229 1590 720 128 ]
T [ 557 1018 2869 10 21 129 106 26 10 505 1800 206 580 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages