Detailed information of deep learning profile BP001141.1

This page shows detailed deep learning-derived predictions and motifs for REST in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP001141.1
Cell line/tissue: GM23338
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR871KYB
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.72e-04 -6.23e-04 1.79e-02 2.99e-04 -6.52e-06 1.41e-04 -7.75e-05 3.63e-04 1.61e-04 1.16e-05 4.74e-02 8.23e-04 -2.04e-03 ]
C [ -2.25e-04 9.95e-04 2.12e-02 -4.14e-04 1.53e-01 4.77e-05 6.31e-05 1.00e-04 1.35e-01 1.46e-01 -5.98e-04 1.37e-03 3.30e-02 ]
G [ 5.86e-02 5.55e-02 8.12e-05 7.33e-02 5.40e-05 1.53e-05 1.10e-01 3.05e-04 -2.37e-07 2.53e-05 1.92e-03 2.45e-02 3.54e-03 ]
T [ -4.89e-04 -5.60e-04 5.97e-04 -1.62e-03 5.45e-07 1.25e-01 -5.43e-05 1.05e-01 -3.60e-05 -1.40e-05 -6.52e-04 -2.97e-04 -8.68e-04 ]

Frequency matrix

A [ 580 206 1800 505 10 26 106 129 21 10 2869 1018 557 ]
C [ 128 720 1590 229 4288 11 347 36 4185 4272 412 716 1222 ]
G [ 3311 2871 100 3110 5 22 3853 179 7 18 536 1449 2057 ]
T [ 311 533 840 486 27 4271 24 3986 117 30 513 1147 494 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages