This page shows detailed deep learning-derived predictions and motifs for CTCF in choroid plexus epithelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001142.1 |
| Cell line/tissue: | choroid plexus epithelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTL |
| Model: | BPNet |
| A [ | -2.15e-03 | -1.73e-03 | 2.02e-02 | -1.61e-03 | -5.23e-03 | 6.53e-02 | -4.58e-04 | 8.84e-03 | -6.15e-03 | -1.40e-03 | -2.42e-03 | -3.37e-03 | 4.40e-03 | -2.82e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.97e-02 | 1.58e-01 | 4.66e-04 | 5.14e-02 | 1.85e-02 | -2.02e-04 | -6.37e-05 | -8.54e-05 | 1.81e-04 | 6.90e-05 | 1.76e-03 | 6.29e-02 | 9.31e-04 | 2.50e-02 | ] |
| G [ | -1.62e-03 | -5.13e-04 | 7.50e-03 | 1.38e-02 | -1.96e-03 | 2.03e-03 | 1.64e-01 | 7.64e-02 | 5.27e-02 | 1.43e-01 | 9.34e-02 | 5.67e-04 | 4.61e-02 | 9.00e-03 | ] |
| T [ | -2.75e-03 | -9.93e-04 | -5.86e-03 | -2.28e-03 | 1.61e-02 | -2.39e-03 | -4.76e-04 | -9.01e-04 | 8.65e-04 | -1.23e-03 | -1.24e-03 | -3.22e-03 | -3.51e-03 | -7.11e-04 | ] |
| A [ | 7404 | 2416 | 48570 | 5446 | 12561 | 62342 | 637 | 25885 | 8285 | 1981 | 4246 | 15560 | 27716 | 10085 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 60875 | 74865 | 4075 | 41810 | 31752 | 2317 | 126 | 1089 | 3725 | 1333 | 6329 | 48294 | 7846 | 34459 | ] |
| G [ | 5221 | 441 | 11426 | 28147 | 6730 | 7745 | 77026 | 49745 | 43548 | 72864 | 60642 | 5645 | 35968 | 22941 | ] |
| T [ | 4748 | 526 | 14177 | 2845 | 27205 | 5845 | 459 | 1529 | 22691 | 2070 | 7031 | 8749 | 6719 | 10764 | ] |
