Detailed information of deep learning profile BP001143.1

This page shows detailed deep learning-derived predictions and motifs for E4F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001143.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR439WAF
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.34e-04 6.25e-03 -1.11e-06 -6.06e-06 1.48e-05 6.87e-05 6.92e-05 -1.44e-06 -5.27e-05 -2.62e-06 5.48e-04 ]
C [ 4.69e-03 1.35e-04 1.17e-02 1.75e-05 -4.51e-06 1.56e-02 2.40e-02 1.09e-04 2.00e-03 1.10e-03 7.38e-04 ]
G [ 5.29e-04 1.02e-03 -4.23e-05 1.93e-05 4.98e-05 3.02e-05 0.00e+00 1.77e-02 5.27e-03 1.93e-03 -2.66e-04 ]
T [ -3.45e-05 -2.84e-04 3.62e-04 1.79e-02 1.54e-02 1.02e-04 -3.95e-06 2.17e-04 -4.52e-05 1.03e-04 3.78e-03 ]

Frequency matrix

A [ 1418 5305 297 280 434 208 4 54 496 1801 2080 ]
C [ 6110 2113 9631 412 740 11792 12511 190 4322 4210 3784 ]
G [ 2569 3113 662 257 614 159 3 9944 6165 3465 1789 ]
T [ 2421 1986 1928 11569 10730 359 0 2330 1536 3042 4865 ]

Other motif patterns

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000157.1 E4F1 ENCSR731LHZ K562 Homo sapiens
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