Detailed information of deep learning profile BP001143.1

This page shows detailed deep learning-derived predictions and motifs for E4F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001143.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR439WAF
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.78e-03 1.03e-04 -4.52e-05 2.17e-04 -3.95e-06 1.02e-04 1.54e-02 1.79e-02 3.62e-04 -2.84e-04 -3.45e-05 ]
C [ -2.66e-04 1.93e-03 5.27e-03 1.77e-02 0.00e+00 3.02e-05 4.98e-05 1.93e-05 -4.23e-05 1.02e-03 5.29e-04 ]
G [ 7.38e-04 1.10e-03 2.00e-03 1.09e-04 2.40e-02 1.56e-02 -4.51e-06 1.75e-05 1.17e-02 1.35e-04 4.69e-03 ]
T [ 5.48e-04 -2.62e-06 -5.27e-05 -1.44e-06 6.92e-05 6.87e-05 1.48e-05 -6.06e-06 -1.11e-06 6.25e-03 -2.34e-04 ]

Frequency matrix

A [ 4865 3042 1536 2330 0 359 10730 11569 1928 1986 2421 ]
C [ 1789 3465 6165 9944 3 159 614 257 662 3113 2569 ]
G [ 3784 4210 4322 190 12511 11792 740 412 9631 2113 6110 ]
T [ 2080 1801 496 54 4 208 434 280 297 5305 1418 ]

Other motif patterns

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000157.1 E4F1 ENCSR731LHZ K562 Homo sapiens
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