This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12873 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001145.1 |
| Cell line/tissue: | GM12873 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRP |
| Model: | BPNet |
| A [ | -3.47e-04 | -3.29e-03 | -3.20e-03 | -7.95e-04 | -1.02e-03 | 3.91e-03 | -8.56e-04 | -4.49e-04 | -2.34e-03 | 2.18e-02 | -2.06e-03 | -4.98e-03 | -7.61e-04 | -2.62e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.50e-03 | 4.48e-02 | 9.71e-04 | 8.91e-02 | 1.55e-01 | 5.96e-02 | 8.45e-02 | 1.76e-01 | 2.00e-03 | -1.99e-03 | 1.17e-02 | 5.57e-03 | -5.41e-04 | -1.88e-03 | ] |
| G [ | 2.86e-02 | 1.49e-03 | 7.21e-02 | 2.81e-03 | -2.94e-04 | -3.70e-04 | -1.95e-04 | -1.05e-04 | -3.14e-04 | 1.47e-02 | 6.22e-02 | -1.43e-05 | 1.80e-01 | 1.04e-01 | ] |
| T [ | -2.43e-03 | 5.61e-03 | -2.93e-03 | -2.55e-03 | -1.25e-03 | -5.05e-03 | 1.03e-02 | -4.38e-04 | 7.31e-02 | -4.40e-03 | -1.41e-03 | 2.55e-02 | -1.33e-03 | -1.81e-03 | ] |
| A [ | 5489 | 3310 | 4540 | 3412 | 788 | 17297 | 487 | 190 | 3517 | 18423 | 1604 | 8187 | 185 | 2890 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15193 | 22494 | 1531 | 43102 | 47294 | 26072 | 31645 | 48499 | 4223 | 4088 | 17168 | 5927 | 105 | 2631 | ] |
| G [ | 22748 | 3385 | 36178 | 1315 | 213 | 1924 | 341 | 50 | 1355 | 18818 | 27201 | 2249 | 48169 | 39204 | ] |
| T [ | 5606 | 19848 | 6788 | 1208 | 742 | 3744 | 16564 | 298 | 39941 | 7709 | 3063 | 32674 | 578 | 4311 | ] |
