Detailed information of deep learning profile BP001152.1

This page shows detailed deep learning-derived predictions and motifs for ATF4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF4
Model ID: BP001152.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: ATF-4-related factors
Best Match(es): MA0833.1 MA0833.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18848  
Source: ENCSR145TSJ
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.45e-02 -1.37e-05 -5.35e-06 9.08e-02 -1.51e-04 -3.81e-06 1.39e-03 1.15e-01 1.23e-01 -5.17e-04 ]
C [ 3.85e-03 5.43e-05 5.60e-06 -5.83e-05 4.57e-03 -8.75e-06 6.25e-02 9.12e-06 -9.88e-08 1.06e-02 ]
G [ 2.45e-03 -1.56e-06 1.17e-01 1.39e-05 -3.22e-04 1.47e-01 -2.25e-05 -4.62e-06 -7.27e-06 -4.77e-04 ]
T [ -1.54e-04 1.13e-01 3.20e-04 4.84e-05 7.21e-02 6.55e-06 4.78e-03 -4.91e-06 8.26e-06 3.68e-02 ]

Frequency matrix

A [ 24539 284 91 36453 685 30 12005 40121 39967 1456 ]
C [ 7982 380 140 613 2398 22 20934 147 46 11432 ]
G [ 7214 67 39404 2149 1860 40278 180 66 253 4925 ]
T [ 628 39632 728 1148 35419 33 7244 29 97 22549 ]

4 profiles found for the same TF (ATF4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000464.1 ATF4 ENCSR803PAI HepG2 Homo sapiens
BP000520.1 ATF4 ENCSR044UJJ K562 Homo sapiens
BP000573.1 ATF4 ENCSR288ZFV HepG2 Homo sapiens
BP001160.1 ATF4 ENCSR965SHB HepG2 Homo sapiens
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