This page shows detailed deep learning-derived predictions and motifs for CTCF in gastrocnemius medialis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001154.1 |
| Cell line/tissue: | gastrocnemius medialis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR428BKN |
| Model: | BPNet |
| A [ | -7.42e-04 | -2.22e-03 | -2.66e-03 | -2.45e-04 | -3.64e-04 | 8.62e-03 | -3.05e-04 | -2.21e-04 | -1.58e-03 | 1.58e-02 | -1.63e-03 | -4.75e-03 | -4.21e-04 | -2.51e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.25e-02 | 4.76e-02 | -3.98e-04 | 9.79e-02 | 1.49e-01 | 4.66e-02 | 6.31e-02 | 1.56e-01 | 1.53e-04 | -1.93e-03 | 9.54e-03 | 6.22e-03 | -1.92e-04 | -1.60e-03 | ] |
| G [ | 2.46e-02 | -5.62e-04 | 8.31e-02 | -5.37e-05 | -7.02e-05 | -1.94e-04 | -2.69e-05 | -2.30e-05 | -1.83e-04 | 1.70e-02 | 6.27e-02 | -8.12e-04 | 1.66e-01 | 8.72e-02 | ] |
| T [ | -2.31e-03 | 1.05e-02 | -2.32e-03 | -1.11e-03 | -5.22e-04 | -2.60e-03 | 2.05e-02 | -3.05e-04 | 7.19e-02 | -4.96e-03 | -1.29e-03 | 3.03e-02 | -4.24e-04 | -1.25e-03 | ] |
| A [ | 2698 | 1412 | 2401 | 2403 | 234 | 9876 | 392 | 38 | 1515 | 9943 | 741 | 3393 | 104 | 1491 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8966 | 14474 | 1245 | 23721 | 28237 | 16086 | 16821 | 28708 | 2232 | 2493 | 9260 | 4838 | 91 | 1578 | ] |
| G [ | 14366 | 1850 | 21368 | 1718 | 130 | 1394 | 553 | 18 | 1074 | 12233 | 17548 | 1231 | 28281 | 23461 | ] |
| T [ | 2839 | 11134 | 3855 | 1027 | 268 | 1513 | 11103 | 105 | 24047 | 4200 | 1320 | 19407 | 393 | 2339 | ] |
