This page shows detailed deep learning-derived predictions and motifs for CTCF in neural cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001155.1 |
| Cell line/tissue: | neural cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR822CEA |
| Model: | BPNet |
| A [ | -8.01e-04 | -2.17e-03 | -1.89e-03 | -1.89e-04 | -3.65e-04 | 7.62e-03 | -3.44e-04 | -2.51e-04 | -1.32e-03 | 1.36e-02 | -1.41e-03 | -3.56e-03 | -4.66e-04 | -2.08e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.33e-03 | 3.99e-02 | -4.28e-05 | 8.08e-02 | 1.22e-01 | 3.61e-02 | 5.12e-02 | 1.24e-01 | 6.55e-04 | -1.77e-03 | 8.29e-03 | 4.36e-03 | -3.11e-04 | -1.32e-03 | ] |
| G [ | 2.45e-02 | 1.18e-04 | 6.78e-02 | 7.08e-04 | -6.73e-05 | -7.11e-05 | -5.83e-05 | -4.76e-05 | -2.21e-04 | 1.15e-02 | 4.47e-02 | 2.14e-06 | 1.26e-01 | 6.19e-02 | ] |
| T [ | -1.84e-03 | 8.25e-03 | -2.45e-03 | -1.08e-03 | -5.32e-04 | -2.71e-03 | 1.56e-02 | -2.24e-04 | 5.30e-02 | -3.02e-03 | -1.39e-03 | 2.08e-02 | -7.81e-04 | -1.04e-03 | ] |
| A [ | 5459 | 3103 | 4151 | 4402 | 663 | 16929 | 769 | 350 | 4055 | 17325 | 1940 | 7742 | 356 | 3651 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15099 | 24173 | 2386 | 39989 | 47505 | 25784 | 29571 | 48182 | 5227 | 5232 | 16867 | 8610 | 446 | 4257 | ] |
| G [ | 23414 | 3332 | 35689 | 3143 | 342 | 2913 | 1173 | 161 | 2455 | 18855 | 27156 | 3290 | 47641 | 36390 | ] |
| T [ | 5386 | 18750 | 7133 | 1824 | 848 | 3732 | 17846 | 665 | 37621 | 7946 | 3395 | 29716 | 915 | 5061 | ] |
