This page shows detailed deep learning-derived predictions and motifs for CTCF in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001156.1 |
| Cell line/tissue: | H1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BNH |
| Model: | BPNet |
| A [ | -1.39e-03 | -6.79e-04 | 1.21e-02 | -1.40e-03 | -3.60e-03 | 4.08e-02 | -3.18e-04 | 7.49e-03 | -3.74e-03 | -7.31e-04 | -1.45e-03 | -3.42e-03 | 3.21e-03 | -2.32e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.47e-02 | 1.20e-01 | 6.87e-04 | 4.04e-02 | 1.10e-02 | -1.42e-04 | -3.79e-05 | -9.18e-05 | -1.05e-04 | -1.46e-05 | 1.44e-03 | 5.72e-02 | 8.88e-04 | 2.41e-02 | ] |
| G [ | -1.02e-03 | -2.65e-04 | 2.84e-03 | 1.00e-02 | -1.01e-03 | 1.11e-03 | 1.21e-01 | 5.38e-02 | 3.94e-02 | 1.13e-01 | 7.28e-02 | 5.19e-04 | 3.84e-02 | 8.40e-03 | ] |
| T [ | -2.24e-03 | -5.56e-04 | -4.21e-03 | -1.84e-03 | 1.02e-02 | -1.75e-03 | -2.35e-04 | -4.82e-04 | 2.53e-03 | -4.70e-04 | -6.67e-04 | -2.49e-03 | -2.39e-03 | -1.26e-03 | ] |
| A [ | 5950 | 207 | 42650 | 4519 | 10862 | 53787 | 125 | 22762 | 6410 | 1470 | 3115 | 12277 | 23797 | 7839 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 53655 | 68215 | 4066 | 36319 | 27777 | 1965 | 24 | 800 | 3009 | 817 | 5403 | 44926 | 6405 | 32796 | ] |
| G [ | 4708 | 24 | 7999 | 25032 | 6580 | 6953 | 68280 | 43786 | 38538 | 64922 | 53894 | 4466 | 33044 | 19383 | ] |
| T [ | 4183 | 51 | 13782 | 2627 | 23278 | 5791 | 68 | 1149 | 20540 | 1289 | 6084 | 6828 | 5251 | 8479 | ] |
