Detailed information of deep learning profile BP001159.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in adrenal gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP001159.1
Cell line/tissue: adrenal gland
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR014GSQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.37e-03 -4.21e-04 2.21e-02 -1.15e-03 -4.01e-03 6.09e-02 -2.52e-04 1.38e-02 -1.94e-03 -5.04e-04 -7.06e-04 -1.79e-03 6.91e-03 -2.00e-03 ]
C [ 7.24e-02 1.31e-01 -5.18e-04 4.79e-02 1.21e-02 -1.73e-04 -7.51e-06 -1.79e-05 -2.51e-05 -1.79e-05 2.54e-04 6.30e-02 -1.45e-04 1.97e-02 ]
G [ -1.20e-03 -1.25e-04 5.04e-03 9.71e-03 -1.57e-03 2.95e-04 1.30e-01 4.83e-02 3.67e-02 1.19e-01 7.37e-02 -1.44e-04 3.62e-02 9.73e-03 ]
T [ -1.98e-03 -3.03e-04 -3.53e-03 -1.32e-03 1.52e-02 -1.50e-03 -1.73e-04 -2.89e-04 4.39e-03 -3.48e-04 -7.43e-04 -2.26e-03 -1.93e-03 -8.50e-04 ]

Frequency matrix

A [ 3063 428 24680 1998 5658 30759 300 13687 2365 682 1548 5666 14279 4147 ]
C [ 30106 36646 1704 21923 15172 1269 85 491 2045 500 2442 26158 2858 17516 ]
G [ 2044 78 6184 12317 3038 3149 36721 22590 20521 35469 30229 2096 17881 11641 ]
T [ 2043 104 4688 1019 13389 2079 150 489 12325 605 3037 3336 2238 3952 ]

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000194.1 CTCF ENCSR000DVA fibroblast of lung Homo sapiens
BP000200.1 CTCF ENCSR266CJT spleen Homo sapiens
BP000201.1 CTCF ENCSR773JBP esophagus squamous epithelium Homo sapiens
BP000202.1 CTCF ENCSR000AOO astrocyte Homo sapiens
BP000207.1 CTCF ENCSR074SFL esophagus muscularis mucosa Homo sapiens
BP000209.1 CTCF ENCSR000DND pancreas Homo sapiens
BP000210.1 CTCF ENCSR687APM body of pancreas Homo sapiens
BP000212.1 CTCF ENCSR138FTN heart right ventricle Homo sapiens
BP000217.1 CTCF ENCSR298ZPF gastroesophageal sphincter Homo sapiens
BP000220.1 CTCF ENCSR296JFK heart left ventricle Homo sapiens
Showing 10 profiles of page 1 from 44 pages