Detailed information of deep learning profile BP001163.1

This page shows detailed deep learning-derived predictions and motifs for SREBF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SREBF1
Model ID: BP001163.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0829.3 MA0595.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36956  
Source: ENCSR197DJH
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.38e-02 -2.87e-05 -3.01e-06 4.94e-02 -1.50e-06 -1.26e-04 -1.67e-04 3.02e-06 4.70e-02 -2.73e-05 ]
C [ -1.55e-04 -1.18e-05 6.42e-02 1.07e-06 6.07e-02 2.44e-02 3.92e-04 1.82e-04 -6.30e-05 5.47e-03 ]
G [ 5.86e-03 -9.82e-06 9.22e-05 1.09e-04 1.99e-04 8.99e-03 -6.84e-06 6.16e-02 -3.24e-05 -9.20e-04 ]
T [ -2.13e-05 5.12e-02 -1.52e-06 -1.10e-04 -1.20e-05 -9.23e-06 3.85e-02 -1.73e-05 -5.51e-05 2.61e-02 ]

Frequency matrix

A [ 5719 357 40 8563 4 361 461 6 7849 51 ]
C [ 855 174 8709 9 8458 6377 172 191 208 2141 ]
G [ 2298 55 161 93 379 2143 29 8680 250 1747 ]
T [ 43 8328 4 249 73 33 8252 37 607 4974 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (SREBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000710.1 SREBF1 ENCSR815ZDS K562 Homo sapiens
BP000899.1 SREBF1 ENCSR897MYK A549 Homo sapiens
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