Detailed information of deep learning profile BP001164.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP001164.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR000BSQ
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.05e-03 -3.51e-04 1.29e-03 6.17e-07 1.92e-06 -3.49e-05 1.42e-02 4.04e-06 -2.64e-04 -3.06e-04 ]
C [ 1.27e-02 3.98e-02 2.18e-05 6.06e-02 4.44e-02 3.68e-02 4.99e-03 6.20e-02 -1.95e-04 2.34e-02 ]
G [ -3.56e-04 -1.05e-04 2.58e-02 6.03e-06 3.98e-05 4.63e-05 5.38e-05 -2.83e-07 2.67e-02 -3.41e-04 ]
T [ -8.33e-04 -4.13e-04 -1.12e-03 7.28e-06 -1.37e-05 2.90e-04 -5.33e-05 -3.56e-06 -1.38e-03 6.12e-06 ]

Frequency matrix

A [ 5519 1210 7063 25 322 449 14189 12 6644 1748 ]
C [ 29433 38583 1508 42718 40419 35279 22849 42756 5025 29989 ]
G [ 5072 1436 28946 276 1835 2109 4948 148 25148 6809 ]
T [ 3038 1833 5544 43 486 5225 1077 146 6245 4516 ]

Other motif patterns

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
Showing 10 profiles of page 1 from 1 pages
  • 1 (current)