This page shows detailed deep learning-derived predictions and motifs for CTCF in gastroesophageal sphincter using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001169.1 |
| Cell line/tissue: | gastroesophageal sphincter |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR146BGM |
| Model: | BPNet |
| A [ | -1.67e-03 | -5.31e-04 | 2.65e-02 | -1.91e-03 | -6.11e-03 | 7.25e-02 | -3.52e-04 | 1.84e-02 | -3.42e-03 | -8.41e-04 | -1.44e-03 | -3.20e-03 | 1.00e-02 | -3.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.15e-02 | 1.78e-01 | -6.55e-04 | 6.34e-02 | 1.97e-02 | 3.46e-05 | 8.98e-06 | 1.10e-04 | 3.28e-04 | 3.11e-05 | -1.46e-04 | 9.11e-02 | -6.73e-04 | 3.03e-02 | ] |
| G [ | -1.57e-03 | -1.96e-04 | 7.12e-03 | 1.27e-02 | -2.07e-03 | 7.45e-04 | 1.74e-01 | 6.77e-02 | 4.92e-02 | 1.67e-01 | 1.12e-01 | -6.56e-04 | 5.53e-02 | 1.48e-02 | ] |
| T [ | -2.91e-03 | -3.89e-04 | -5.59e-03 | -1.82e-03 | 1.64e-02 | -2.33e-03 | -3.36e-04 | -4.25e-04 | 5.42e-03 | -5.48e-04 | -2.44e-04 | -2.82e-03 | -3.11e-03 | -1.62e-03 | ] |
| A [ | 3827 | 44 | 26694 | 2377 | 6568 | 32572 | 433 | 15099 | 2967 | 763 | 1453 | 6380 | 15497 | 4306 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31533 | 40773 | 2142 | 23443 | 16159 | 1723 | 114 | 724 | 2246 | 320 | 2292 | 28791 | 2553 | 19378 | ] |
| G [ | 2924 | 19 | 6250 | 13657 | 3950 | 3815 | 40082 | 24434 | 22124 | 39225 | 33596 | 1975 | 20463 | 12895 | ] |
| T [ | 2568 | 16 | 5766 | 1375 | 14174 | 2743 | 223 | 595 | 13516 | 544 | 3511 | 3706 | 2339 | 4273 | ] |
