This page shows detailed deep learning-derived predictions and motifs for CTCF in lower lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001171.1 |
| Cell line/tissue: | lower lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR195POA |
| Model: | BPNet |
| A [ | -1.27e-03 | -3.12e-03 | -3.28e-03 | -2.35e-04 | -6.25e-04 | 5.20e-03 | -5.24e-04 | -2.50e-04 | -2.21e-03 | 1.93e-02 | -1.83e-03 | -5.59e-03 | -6.14e-04 | -3.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.13e-02 | 4.99e-02 | -8.31e-05 | 1.01e-01 | 1.55e-01 | 4.90e-02 | 6.63e-02 | 1.64e-01 | 4.86e-04 | -2.32e-03 | 1.07e-02 | 6.81e-03 | -2.87e-04 | -1.51e-03 | ] |
| G [ | 2.80e-02 | -1.26e-04 | 7.97e-02 | 7.48e-04 | -6.86e-05 | 1.13e-04 | -8.38e-05 | -3.66e-05 | -5.72e-05 | 1.66e-02 | 5.93e-02 | -1.94e-04 | 1.67e-01 | 8.97e-02 | ] |
| T [ | -2.79e-03 | 8.31e-03 | -2.53e-03 | -1.62e-03 | -8.05e-04 | -3.80e-03 | 1.58e-02 | -3.61e-04 | 7.35e-02 | -4.90e-03 | -1.80e-03 | 2.46e-02 | -9.15e-04 | -1.66e-03 | ] |
| A [ | 3527 | 1882 | 3086 | 2950 | 37 | 13187 | 382 | 152 | 2099 | 13490 | 1138 | 4934 | 198 | 2355 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11906 | 19189 | 1097 | 32784 | 37764 | 20707 | 22597 | 37433 | 2896 | 3386 | 13059 | 6143 | 206 | 2493 | ] |
| G [ | 18711 | 1909 | 28481 | 1331 | 13 | 1813 | 417 | 84 | 1377 | 15287 | 21579 | 1743 | 36852 | 29570 | ] |
| T [ | 3782 | 14947 | 5264 | 862 | 113 | 2220 | 14531 | 258 | 31555 | 5764 | 2151 | 25107 | 671 | 3509 | ] |