This page shows detailed deep learning-derived predictions and motifs for CTCF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001178.1 |
| Cell line/tissue: | K562 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DWE |
| Model: | BPNet |
| A [ | -6.23e-04 | -3.87e-03 | -3.59e-03 | -1.05e-03 | -9.34e-04 | 2.39e-03 | -8.17e-04 | -3.96e-04 | -2.61e-03 | 2.19e-02 | -2.43e-03 | -6.35e-03 | -7.97e-04 | -2.97e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.62e-03 | 5.49e-02 | 7.34e-04 | 1.05e-01 | 1.70e-01 | 6.26e-02 | 8.31e-02 | 1.87e-01 | 1.17e-03 | -2.37e-03 | 1.16e-02 | 7.19e-03 | -5.46e-04 | -2.26e-03 | ] |
| G [ | 3.33e-02 | 7.70e-04 | 8.23e-02 | 2.12e-03 | -1.88e-04 | -4.45e-04 | -2.11e-04 | -9.45e-05 | -3.38e-04 | 1.53e-02 | 6.21e-02 | 7.62e-05 | 1.83e-01 | 1.03e-01 | ] |
| T [ | -3.25e-03 | 5.47e-03 | -3.26e-03 | -2.40e-03 | -1.19e-03 | -5.67e-03 | 1.11e-02 | -4.19e-04 | 7.95e-02 | -5.36e-03 | -1.70e-03 | 2.64e-02 | -1.37e-03 | -2.00e-03 | ] |
| A [ | 6852 | 3980 | 5302 | 4746 | 1001 | 16289 | 1045 | 286 | 4129 | 19703 | 1852 | 9533 | 199 | 3257 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16444 | 27816 | 3515 | 45239 | 54042 | 33355 | 37329 | 55975 | 5399 | 5342 | 20075 | 8319 | 206 | 3680 | ] |
| G [ | 27282 | 5375 | 38584 | 4184 | 696 | 2638 | 661 | 123 | 1790 | 23227 | 31159 | 3519 | 55647 | 45038 | ] |
| T [ | 6262 | 19668 | 9438 | 2670 | 1100 | 4558 | 17804 | 455 | 45521 | 8568 | 3753 | 35468 | 787 | 4863 | ] |