This page shows detailed deep learning-derived predictions and motifs for CTCF in WI38 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001179.1 |
| Cell line/tissue: | WI38 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DYB |
| Model: | BPNet |
| A [ | -1.38e-03 | -3.61e-03 | -3.46e-03 | -1.44e-03 | -7.53e-04 | 1.94e-03 | -6.90e-04 | -2.82e-04 | -2.32e-03 | 2.01e-02 | -2.20e-03 | -6.05e-03 | -6.71e-04 | -3.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.13e-02 | 5.66e-02 | 5.94e-05 | 1.14e-01 | 1.82e-01 | 6.09e-02 | 7.71e-02 | 1.99e-01 | 3.63e-04 | -2.39e-03 | 1.38e-02 | 7.20e-03 | -3.96e-04 | -1.50e-03 | ] |
| G [ | 3.31e-02 | 2.10e-04 | 9.06e-02 | 9.16e-04 | -8.37e-05 | -3.13e-04 | -9.48e-05 | -8.14e-05 | -3.59e-04 | 1.79e-02 | 6.97e-02 | -3.22e-04 | 1.99e-01 | 1.07e-01 | ] |
| T [ | -3.74e-03 | 5.44e-03 | -3.67e-03 | -1.76e-03 | -1.02e-03 | -4.62e-03 | 1.47e-02 | -4.06e-04 | 8.91e-02 | -6.68e-03 | -2.16e-03 | 2.81e-02 | -9.72e-04 | -2.51e-03 | ] |
| A [ | 4055 | 2352 | 3304 | 3047 | 556 | 11656 | 554 | 158 | 2249 | 13355 | 1119 | 5265 | 165 | 2197 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11190 | 18366 | 1952 | 30710 | 36060 | 21880 | 23309 | 37070 | 3112 | 3027 | 12718 | 5457 | 173 | 2347 | ] |
| G [ | 18378 | 2815 | 26452 | 2308 | 368 | 1535 | 399 | 80 | 1151 | 15604 | 21600 | 1977 | 36758 | 29835 | ] |
| T [ | 3972 | 14061 | 5888 | 1529 | 611 | 2524 | 13334 | 287 | 31083 | 5608 | 2159 | 24896 | 499 | 3215 | ] |