This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12865 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001183.1 |
| Cell line/tissue: | GM12865 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRE |
| Model: | BPNet |
| A [ | -1.31e-03 | -3.59e-03 | -3.75e-03 | -7.25e-04 | -7.53e-04 | 4.52e-03 | -5.66e-04 | -3.46e-04 | -2.14e-03 | 2.16e-02 | -2.30e-03 | -6.63e-03 | -6.76e-04 | -3.61e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.02e-02 | 5.75e-02 | 4.97e-04 | 1.09e-01 | 1.80e-01 | 6.17e-02 | 8.46e-02 | 1.91e-01 | 7.93e-04 | -2.62e-03 | 1.31e-02 | 6.32e-03 | -3.79e-04 | -1.72e-03 | ] |
| G [ | 3.41e-02 | 8.15e-04 | 9.13e-02 | 1.85e-03 | -7.75e-05 | -3.51e-04 | -1.83e-04 | -7.69e-05 | -3.79e-04 | 1.75e-02 | 6.66e-02 | 1.13e-04 | 1.93e-01 | 1.06e-01 | ] |
| T [ | -2.89e-03 | 6.43e-03 | -3.81e-03 | -2.24e-03 | -1.09e-03 | -4.83e-03 | 1.31e-02 | -4.17e-04 | 8.18e-02 | -5.18e-03 | -1.68e-03 | 2.78e-02 | -9.04e-04 | -2.00e-03 | ] |
| A [ | 4651 | 2542 | 4128 | 3710 | 438 | 14394 | 509 | 57 | 2582 | 16086 | 1288 | 6501 | 4 | 2620 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12637 | 21336 | 1975 | 35721 | 42489 | 24788 | 27001 | 43386 | 3345 | 3596 | 15141 | 5708 | 8 | 2665 | ] |
| G [ | 21594 | 3003 | 30894 | 2521 | 160 | 1589 | 332 | 24 | 1145 | 17384 | 24706 | 1982 | 43531 | 34345 | ] |
| T [ | 4694 | 16696 | 6580 | 1625 | 490 | 2806 | 15735 | 110 | 36505 | 6511 | 2442 | 29386 | 34 | 3947 | ] |
