Detailed information of deep learning profile BP001184.1

This page shows detailed deep learning-derived predictions and motifs for NFIX in K562 using a single trained BPNet model.

Model details

Name: NFIX
Model ID: BP001184.1
Cell line/tissue: K562
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1528.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14938  
Source: ENCSR574VJG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.48e-03 -9.38e-05 -9.27e-06 5.88e-06 6.93e-04 2.35e-02 -1.04e-03 -1.41e-03 -1.56e-03 -2.45e-03 -2.46e-05 -2.83e-07 -5.20e-06 8.98e-02 5.61e-02 ]
C [ 2.07e-02 -2.97e-06 3.79e-06 -1.67e-07 9.50e-02 -1.76e-03 7.86e-03 2.12e-03 5.29e-04 3.77e-04 -1.91e-05 1.39e-01 1.30e-01 -1.71e-04 -2.11e-04 ]
G [ -5.26e-04 -1.41e-04 1.30e-01 1.38e-01 -4.66e-05 2.24e-04 -2.13e-04 2.26e-03 8.86e-03 -2.53e-03 1.01e-01 -6.31e-07 8.36e-06 -1.25e-06 4.24e-03 ]
T [ 2.25e-02 8.88e-02 -5.27e-06 -1.47e-05 -3.90e-05 -1.46e-03 -1.37e-03 -1.87e-03 -9.55e-04 1.70e-02 3.68e-04 -1.60e-06 -1.08e-06 -5.22e-05 -2.71e-04 ]

Frequency matrix

A [ 326 95 30 58 858 5398 1869 2494 2202 2459 47 14 13 9037 5759 ]
C [ 4033 48 12 5 8538 1426 3434 2288 2069 391 73 9526 9526 418 156 ]
G [ 183 343 9515 9498 125 383 2099 2236 3474 1417 8677 10 9 46 3390 ]
T [ 5039 9096 25 21 61 2375 2180 2564 1837 5316 785 32 34 81 277 ]