This page shows detailed deep learning-derived predictions and motifs for CTCF in brain microvascular endothelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001186.1 |
| Cell line/tissue: | brain microvascular endothelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTA |
| Model: | BPNet |
| A [ | -7.52e-04 | -3.42e-03 | -3.43e-03 | -1.40e-03 | -1.42e-03 | 1.51e-03 | -8.92e-04 | -4.03e-04 | -2.42e-03 | 1.59e-02 | -2.22e-03 | -5.91e-03 | -9.68e-04 | -2.72e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.76e-03 | 4.18e-02 | 1.08e-03 | 8.92e-02 | 1.42e-01 | 5.30e-02 | 8.06e-02 | 1.68e-01 | 2.41e-03 | -1.45e-03 | 1.47e-02 | 6.73e-03 | -3.98e-04 | -1.37e-03 | ] |
| G [ | 2.47e-02 | 1.62e-03 | 6.21e-02 | 2.82e-03 | 7.45e-05 | 1.86e-04 | -1.60e-04 | -3.52e-05 | -2.47e-04 | 1.69e-02 | 5.48e-02 | 2.25e-04 | 1.60e-01 | 9.54e-02 | ] |
| T [ | -3.18e-03 | 3.60e-03 | -2.92e-03 | -2.49e-03 | -1.52e-03 | -5.70e-03 | 9.02e-03 | -4.28e-04 | 6.53e-02 | -4.47e-03 | -1.59e-03 | 2.19e-02 | -1.38e-03 | -2.17e-03 | ] |
| A [ | 10638 | 7189 | 8383 | 7159 | 2447 | 21112 | 1392 | 54 | 5731 | 26142 | 2567 | 13826 | 33 | 4270 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21937 | 32907 | 6210 | 56536 | 68695 | 42519 | 48942 | 75052 | 7504 | 6480 | 27113 | 9555 | 28 | 4557 | ] |
| G [ | 32703 | 9021 | 46081 | 6980 | 1840 | 3698 | 843 | 20 | 2051 | 31084 | 40706 | 3797 | 74872 | 59973 | ] |
| T [ | 9967 | 26127 | 14570 | 4569 | 2262 | 7915 | 24067 | 118 | 59958 | 11537 | 4859 | 48066 | 311 | 6445 | ] |