This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001188.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR300WOR |
| Model: | BPNet |
| A [ | -1.76e-03 | -9.10e-04 | 2.55e-02 | -2.14e-03 | -5.71e-03 | 6.78e-02 | -3.79e-04 | 2.05e-02 | -3.73e-03 | -7.11e-04 | -1.44e-03 | -3.34e-03 | 1.02e-02 | -2.93e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.01e-02 | 1.76e-01 | -5.69e-04 | 6.26e-02 | 1.60e-02 | -7.40e-05 | -3.36e-05 | -4.78e-05 | 1.38e-04 | -3.62e-05 | 3.50e-04 | 9.86e-02 | -7.09e-04 | 3.40e-02 | ] |
| G [ | -1.73e-03 | -2.91e-04 | 6.79e-03 | 1.15e-02 | -2.28e-03 | 9.76e-04 | 1.84e-01 | 6.81e-02 | 5.60e-02 | 1.77e-01 | 1.17e-01 | -7.29e-04 | 5.66e-02 | 1.24e-02 | ] |
| T [ | -3.03e-03 | -6.90e-04 | -5.78e-03 | -2.04e-03 | 2.00e-02 | -2.47e-03 | -2.51e-04 | -4.79e-04 | 6.39e-03 | -5.42e-04 | -9.86e-05 | -3.47e-03 | -3.55e-03 | -1.78e-03 | ] |
| A [ | 3269 | 19 | 24110 | 1859 | 5399 | 29213 | 13 | 14300 | 1723 | 347 | 869 | 4741 | 14531 | 3374 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 26843 | 34524 | 1362 | 19773 | 13564 | 960 | 1 | 286 | 1231 | 63 | 1299 | 25982 | 1634 | 16902 | ] |
| G [ | 2128 | 5 | 4614 | 11860 | 2647 | 2482 | 34529 | 19623 | 19196 | 33928 | 29550 | 1032 | 16699 | 10948 | ] |
| T [ | 2309 | 1 | 4463 | 1057 | 12940 | 1894 | 6 | 340 | 12398 | 211 | 2831 | 2794 | 1685 | 3325 | ] |
