This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001191.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR851SOK |
| Model: | BPNet |
| A [ | -1.26e-03 | -3.47e-03 | -2.67e-03 | -3.17e-04 | -5.02e-04 | 7.75e-03 | -4.51e-04 | -2.47e-04 | -2.10e-03 | 1.83e-02 | -1.91e-03 | -5.28e-03 | -6.50e-04 | -2.58e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.00e-02 | 5.23e-02 | -3.40e-04 | 9.34e-02 | 1.45e-01 | 4.83e-02 | 6.06e-02 | 1.55e-01 | 2.49e-04 | -2.14e-03 | 1.15e-02 | 5.25e-03 | -4.45e-04 | -1.56e-03 | ] |
| G [ | 3.08e-02 | 1.97e-05 | 8.64e-02 | 7.76e-04 | -4.44e-05 | -3.05e-04 | -1.31e-04 | -7.93e-05 | -1.94e-04 | 1.21e-02 | 5.06e-02 | -4.32e-04 | 1.48e-01 | 7.44e-02 | ] |
| T [ | -2.57e-03 | 8.47e-03 | -3.05e-03 | -1.29e-03 | -6.52e-04 | -4.10e-03 | 1.64e-02 | -3.78e-04 | 6.43e-02 | -4.22e-03 | -1.82e-03 | 2.32e-02 | -9.37e-04 | -1.94e-03 | ] |
| A [ | 3965 | 2032 | 3200 | 3426 | 335 | 15558 | 342 | 224 | 2684 | 15028 | 1460 | 6106 | 73 | 2947 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12591 | 20998 | 975 | 36705 | 41314 | 22538 | 25227 | 41489 | 3483 | 3783 | 15219 | 5498 | 113 | 3011 | ] |
| G [ | 21718 | 1811 | 32592 | 1172 | 107 | 1581 | 312 | 104 | 1321 | 16709 | 22848 | 2250 | 41855 | 32152 | ] |
| T [ | 3965 | 17398 | 5472 | 937 | 483 | 2562 | 16358 | 422 | 34751 | 6720 | 2712 | 28385 | 198 | 4130 | ] |
