This page shows detailed deep learning-derived predictions and motifs for CTCF in GM06990 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001192.1 |
| Cell line/tissue: | GM06990 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DQW |
| Model: | BPNet |
| A [ | -2.59e-03 | -1.84e-03 | 2.09e-02 | -2.06e-03 | -6.79e-03 | 8.13e-02 | -5.20e-04 | 1.29e-02 | -6.32e-03 | -1.12e-03 | -2.65e-03 | -5.40e-03 | 6.68e-03 | -3.60e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.09e-01 | 2.01e-01 | 1.22e-03 | 6.75e-02 | 2.07e-02 | -2.92e-04 | -1.07e-04 | -2.44e-04 | -3.28e-04 | -9.96e-05 | 1.62e-03 | 1.06e-01 | 3.01e-04 | 3.93e-02 | ] |
| G [ | -2.26e-03 | -8.17e-04 | 7.52e-03 | 1.12e-02 | -3.33e-03 | 1.30e-03 | 2.10e-01 | 9.96e-02 | 6.86e-02 | 2.03e-01 | 1.30e-01 | 2.11e-04 | 6.98e-02 | 1.28e-02 | ] |
| T [ | -3.72e-03 | -1.21e-03 | -7.31e-03 | -3.06e-03 | 2.33e-02 | -2.81e-03 | -4.19e-04 | -1.05e-03 | 3.85e-03 | -8.47e-04 | -1.13e-03 | -4.06e-03 | -4.28e-03 | -1.32e-03 | ] |
| A [ | 5831 | 2011 | 36598 | 4540 | 9252 | 47551 | 588 | 19949 | 4430 | 828 | 2161 | 9071 | 21888 | 6050 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 45199 | 55970 | 3921 | 31845 | 23122 | 1939 | 144 | 572 | 2544 | 376 | 3327 | 42209 | 4306 | 29692 | ] |
| G [ | 4419 | 820 | 9309 | 20862 | 5704 | 5545 | 58428 | 38242 | 33497 | 57504 | 49286 | 2742 | 29629 | 17011 | ] |
| T [ | 4052 | 700 | 9672 | 2254 | 21423 | 4466 | 341 | 738 | 19029 | 793 | 4726 | 5479 | 3678 | 6748 | ] |