This page shows detailed deep learning-derived predictions and motifs for CTCF in foreskin fibroblast using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001193.1 |
| Cell line/tissue: | foreskin fibroblast |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUH |
| Model: | BPNet |
| A [ | -2.35e-03 | -9.84e-04 | 3.28e-02 | -2.31e-03 | -6.62e-03 | 1.01e-01 | -4.94e-04 | 1.97e-02 | -5.83e-03 | -1.18e-03 | -2.19e-03 | -3.45e-03 | 6.79e-03 | -4.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.19e-01 | 2.27e-01 | -1.20e-04 | 7.63e-02 | 2.03e-02 | -4.05e-04 | -8.06e-05 | -1.69e-04 | -4.54e-04 | -9.43e-05 | 1.16e-03 | 1.00e-01 | 1.75e-04 | 3.77e-02 | ] |
| G [ | -2.26e-03 | -4.56e-04 | 8.17e-03 | 1.71e-02 | -2.75e-03 | 1.07e-03 | 2.36e-01 | 9.18e-02 | 7.08e-02 | 2.12e-01 | 1.33e-01 | 3.45e-05 | 6.88e-02 | 1.28e-02 | ] |
| T [ | -3.62e-03 | -6.57e-04 | -7.35e-03 | -2.69e-03 | 2.58e-02 | -3.16e-03 | -3.78e-04 | -8.61e-04 | 4.41e-03 | -9.00e-04 | -1.32e-03 | -4.32e-03 | -4.43e-03 | -1.04e-03 | ] |
| A [ | 3520 | 24 | 25205 | 2239 | 6060 | 30149 | 322 | 15005 | 2482 | 198 | 332 | 5843 | 14771 | 3860 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 28376 | 36527 | 1657 | 20367 | 14262 | 1089 | 67 | 259 | 1257 | 23 | 576 | 26871 | 1567 | 17901 | ] |
| G [ | 2296 | 3 | 4313 | 12709 | 3124 | 3090 | 35990 | 20958 | 19998 | 36244 | 33775 | 944 | 18233 | 11280 | ] |
| T [ | 2365 | 3 | 5382 | 1242 | 13111 | 2229 | 178 | 335 | 12820 | 92 | 1873 | 2899 | 1986 | 3516 | ] |
