Detailed information of deep learning profile BP001194.1

This page shows detailed deep learning-derived predictions and motifs for GATA2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GATA2
Model ID: BP001194.1
Cell line/tissue: K562
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0036.1 MA0036.2 MA0036.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23769  
Source: ENCSR000BKM
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.08e-03 -2.53e-04 5.12e-04 7.49e-02 4.47e-05 1.23e-05 1.30e-03 -1.01e-03 -6.83e-04 -6.61e-04 -5.15e-05 -5.12e-04 -2.10e-04 3.27e-04 3.47e-04 2.77e-03 6.67e-03 ]
C [ 8.29e-03 1.60e-04 -1.18e-06 1.37e-05 1.37e-05 8.02e-02 -4.41e-04 2.45e-03 1.68e-03 1.55e-03 1.49e-03 1.42e-03 1.65e-03 2.43e-03 8.57e-03 1.44e-02 2.84e-03 ]
G [ 2.63e-03 -4.09e-04 6.26e-06 2.33e-06 9.97e-06 4.84e-06 2.32e-04 2.85e-03 -1.40e-05 8.00e-04 9.46e-04 9.54e-04 7.77e-04 1.04e-03 1.36e-03 5.65e-04 2.85e-03 ]
T [ -1.68e-03 1.92e-02 3.45e-02 3.03e-05 6.93e-02 5.25e-05 1.14e-02 -9.72e-04 -1.38e-05 -7.29e-04 -1.38e-03 -7.93e-04 -9.36e-04 -1.43e-03 -1.28e-03 -8.99e-04 -1.02e-03 ]

Frequency matrix

A [ 14917 10683 17284 88756 603 10 24799 16243 19794 23529 22274 24633 22348 23660 22719 27108 30204 ]
C [ 32867 20285 4204 50 116 89377 3618 24386 23701 24511 22743 22538 22609 26454 30270 31496 21420 ]
G [ 19554 5663 3492 589 217 10 3397 27530 16335 18291 18083 18993 18888 17166 16433 13794 17732 ]
T [ 22064 52770 64422 6 88465 4 57587 21242 29571 23071 26301 23237 25556 22121 19980 17003 20045 ]

6 profiles found for the same TF (GATA2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000483.1 GATA2 ENCSR000EYB SH-SY5Y Homo sapiens
BP000642.1 GATA2 ENCSR257RKC K562 Homo sapiens
BP000745.1 GATA2 ENCSR897LDT HepG2 Homo sapiens
BP000755.1 GATA2 ENCSR000EWG K562 Homo sapiens
BP000812.1 GATA2 ENCSR706VOO SK-N-SH Homo sapiens
BP001047.1 GATA2 ENCSR000DKA K562 Homo sapiens
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