Detailed information of deep learning profile BP001197.1

This page shows detailed deep learning-derived predictions and motifs for FOXA3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA3
Model ID: BP001197.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA1683.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55318  
Source: ENCSR092OVN
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.67e-04 9.43e-03 -1.98e-07 -2.19e-05 -9.14e-07 7.13e-02 6.10e-05 9.35e-03 -9.31e-04 1.14e-02 ]
C [ 1.27e-05 4.68e-07 -2.31e-07 1.54e-06 1.90e-06 1.79e-06 5.79e-02 -5.95e-05 6.15e-03 -4.27e-04 ]
G [ -6.38e-06 5.55e-02 1.13e-06 1.51e-03 7.69e-03 2.75e-05 -8.95e-06 1.29e-06 -1.75e-04 -2.28e-04 ]
T [ 5.62e-02 3.11e-06 8.25e-02 6.07e-02 5.11e-02 -1.22e-05 9.77e-04 3.74e-03 9.77e-03 5.25e-03 ]

Frequency matrix

A [ 3705 14368 249 501 1167 56288 3766 23723 9126 23797 ]
C [ 1078 428 179 444 690 673 45838 11984 15136 5748 ]
G [ 1250 43398 119 6252 13030 881 1074 1919 10462 7877 ]
T [ 52788 627 58274 51624 43935 979 8142 21196 24097 21399 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (FOXA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000257.1 FOXA3 ENCSR788DXU K562 Homo sapiens
BP000590.1 FOXA3 ENCSR231ZVN K562 Homo sapiens
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