Detailed information of deep learning profile BP001198.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP001198.1
Cell line/tissue: SK-N-SH
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR000EHZ
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.32e-03 -2.90e-04 -4.98e-04 -2.51e-04 1.34e-02 -1.59e-04 1.63e-06 -3.98e-06 -5.41e-07 -3.82e-06 1.74e-02 ]
C [ 2.17e-04 4.36e-02 -3.33e-05 5.86e-02 7.51e-04 1.91e-03 1.36e-06 1.04e-01 -6.76e-05 8.30e-02 -1.53e-03 ]
G [ 4.45e-02 -7.53e-04 5.88e-02 -1.65e-04 1.05e-03 -5.23e-05 1.03e-01 -5.68e-06 9.53e-02 -8.26e-06 4.13e-03 ]
T [ -2.78e-04 -1.29e-04 -3.65e-04 -3.01e-04 -1.22e-03 4.89e-02 -9.17e-07 -6.77e-05 -1.48e-04 9.58e-04 -1.26e-03 ]

Frequency matrix

A [ 4906 5795 4461 3235 7749 1826 296 39 23 39 13721 ]
C [ 8585 18234 6544 21353 16663 8061 88 36803 174 34713 7479 ]
G [ 19769 8742 22368 8912 8620 5168 36570 45 36376 230 12737 ]
T [ 3712 4202 3599 3472 3940 21918 19 86 400 1991 3035 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
Showing 10 profiles of page 1 from 2 pages