Detailed information of deep learning profile BP001198.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP001198.1
Cell line/tissue: SK-N-SH
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR000EHZ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.26e-03 9.58e-04 -1.48e-04 -6.77e-05 -9.17e-07 4.89e-02 -1.22e-03 -3.01e-04 -3.65e-04 -1.29e-04 -2.78e-04 ]
C [ 4.13e-03 -8.26e-06 9.53e-02 -5.68e-06 1.03e-01 -5.23e-05 1.05e-03 -1.65e-04 5.88e-02 -7.53e-04 4.45e-02 ]
G [ -1.53e-03 8.30e-02 -6.76e-05 1.04e-01 1.36e-06 1.91e-03 7.51e-04 5.86e-02 -3.33e-05 4.36e-02 2.17e-04 ]
T [ 1.74e-02 -3.82e-06 -5.41e-07 -3.98e-06 1.63e-06 -1.59e-04 1.34e-02 -2.51e-04 -4.98e-04 -2.90e-04 1.32e-03 ]

Frequency matrix

A [ 3035 1991 400 86 19 21918 3940 3472 3599 4202 3712 ]
C [ 12737 230 36376 45 36570 5168 8620 8912 22368 8742 19769 ]
G [ 7479 34713 174 36803 88 8061 16663 21353 6544 18234 8585 ]
T [ 13721 39 23 39 296 1826 7749 3235 4461 5795 4906 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
Showing 10 profiles of page 1 from 2 pages