Detailed information of deep learning profile BP001200.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001200.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR458VTP
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.91e-03 -8.19e-04 4.78e-03 5.19e-02 7.06e-07 2.02e-02 -1.01e-03 3.73e-03 6.98e-03 -4.85e-04 3.54e-06 -6.48e-05 2.30e-03 1.30e-06 -1.83e-03 ]
C [ -1.67e-04 -3.09e-04 -1.69e-03 -5.74e-04 8.61e-02 -1.78e-03 1.92e-03 -6.93e-04 6.31e-04 2.20e-03 0.00e+00 -3.82e-05 -2.52e-04 7.08e-02 5.91e-03 ]
G [ 8.49e-03 4.21e-02 2.58e-04 -6.05e-04 1.03e-05 2.27e-03 3.78e-03 -5.01e-04 1.82e-03 -1.06e-04 1.01e-01 -4.14e-06 -1.61e-03 1.37e-09 -1.59e-04 ]
T [ -1.88e-03 -4.84e-04 1.14e-03 -6.84e-04 -4.19e-06 -1.91e-03 2.59e-03 2.53e-03 -7.30e-04 3.23e-02 5.35e-06 6.69e-02 7.35e-03 3.60e-05 1.14e-02 ]

Frequency matrix

A [ 19955 11980 17168 34916 0 30380 9002 15220 15437 8426 0 2096 12300 1243 9541 ]
C [ 4932 2570 9648 4074 51240 4138 13087 10207 14149 2926 0 562 10699 48086 16404 ]
G [ 15889 26025 12401 4887 7 3472 15439 10395 12810 1042 51254 238 6632 69 1074 ]
T [ 10478 10679 12038 7377 7 13263 13725 15433 8857 38860 0 48358 21623 1855 24236 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages