Detailed information of deep learning profile BP001200.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001200.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR458VTP
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.91e-03 -8.19e-04 4.78e-03 5.19e-02 7.06e-07 2.02e-02 -1.01e-03 3.73e-03 6.98e-03 -4.85e-04 3.54e-06 -6.48e-05 2.30e-03 1.30e-06 -1.83e-03 ]
C [ -1.67e-04 -3.09e-04 -1.69e-03 -5.74e-04 8.61e-02 -1.78e-03 1.92e-03 -6.93e-04 6.31e-04 2.20e-03 0.00e+00 -3.82e-05 -2.52e-04 7.08e-02 5.91e-03 ]
G [ 8.49e-03 4.21e-02 2.58e-04 -6.05e-04 1.03e-05 2.27e-03 3.78e-03 -5.01e-04 1.82e-03 -1.06e-04 1.01e-01 -4.14e-06 -1.61e-03 1.37e-09 -1.59e-04 ]
T [ -1.88e-03 -4.84e-04 1.14e-03 -6.84e-04 -4.19e-06 -1.91e-03 2.59e-03 2.53e-03 -7.30e-04 3.23e-02 5.35e-06 6.69e-02 7.35e-03 3.60e-05 1.14e-02 ]

Frequency matrix

A [ 19955 11980 17168 34916 0 30380 9002 15220 15437 8426 0 2096 12300 1243 9541 ]
C [ 4932 2570 9648 4074 51240 4138 13087 10207 14149 2926 0 562 10699 48086 16404 ]
G [ 15889 26025 12401 4887 7 3472 15439 10395 12810 1042 51254 238 6632 69 1074 ]
T [ 10478 10679 12038 7377 7 13263 13725 15433 8857 38860 0 48358 21623 1855 24236 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages