Detailed information of deep learning profile BP001200.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001200.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR458VTP
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.14e-02 3.60e-05 7.35e-03 6.69e-02 5.35e-06 3.23e-02 -7.30e-04 2.53e-03 2.59e-03 -1.91e-03 -4.19e-06 -6.84e-04 1.14e-03 -4.84e-04 -1.88e-03 ]
C [ -1.59e-04 1.37e-09 -1.61e-03 -4.14e-06 1.01e-01 -1.06e-04 1.82e-03 -5.01e-04 3.78e-03 2.27e-03 1.03e-05 -6.05e-04 2.58e-04 4.21e-02 8.49e-03 ]
G [ 5.91e-03 7.08e-02 -2.52e-04 -3.82e-05 0.00e+00 2.20e-03 6.31e-04 -6.93e-04 1.92e-03 -1.78e-03 8.61e-02 -5.74e-04 -1.69e-03 -3.09e-04 -1.67e-04 ]
T [ -1.83e-03 1.30e-06 2.30e-03 -6.48e-05 3.54e-06 -4.85e-04 6.98e-03 3.73e-03 -1.01e-03 2.02e-02 7.06e-07 5.19e-02 4.78e-03 -8.19e-04 5.91e-03 ]

Frequency matrix

A [ 24236 1855 21623 48358 0 38860 8857 15433 13725 13263 7 7377 12038 10679 10478 ]
C [ 1074 69 6632 238 51254 1042 12810 10395 15439 3472 7 4887 12401 26025 15889 ]
G [ 16404 48086 10699 562 0 2926 14149 10207 13087 4138 51240 4074 9648 2570 4932 ]
T [ 9541 1243 12300 2096 0 8426 15437 15220 9002 30380 0 34916 17168 11980 19955 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages