This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001203.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR249JOH |
| Model: | BPNet |
| A [ | -1.35e-03 | -3.29e-03 | -3.05e-03 | -2.57e-04 | -5.55e-04 | 6.96e-03 | -5.51e-04 | -2.99e-04 | -2.20e-03 | 1.87e-02 | -1.95e-03 | -4.92e-03 | -8.12e-04 | -2.45e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.65e-03 | 5.41e-02 | -4.27e-04 | 1.01e-01 | 1.49e-01 | 5.17e-02 | 6.44e-02 | 1.62e-01 | 6.05e-04 | -2.00e-03 | 1.15e-02 | 5.43e-03 | -4.91e-04 | -1.85e-03 | ] |
| G [ | 3.44e-02 | -4.05e-05 | 8.71e-02 | 7.62e-04 | -5.73e-05 | -3.36e-04 | -1.89e-04 | -9.86e-05 | -2.96e-04 | 1.24e-02 | 5.10e-02 | -1.71e-04 | 1.53e-01 | 7.56e-02 | ] |
| T [ | -2.61e-03 | 9.53e-03 | -2.76e-03 | -1.50e-03 | -7.13e-04 | -4.39e-03 | 1.61e-02 | -4.41e-04 | 6.47e-02 | -4.99e-03 | -1.84e-03 | 2.03e-02 | -1.13e-03 | -1.75e-03 | ] |
| A [ | 4491 | 2284 | 3636 | 3554 | 136 | 16458 | 429 | 214 | 3032 | 16347 | 1563 | 6823 | 240 | 3274 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13404 | 23505 | 1152 | 40363 | 45610 | 25148 | 27362 | 45364 | 3961 | 4349 | 16511 | 6564 | 365 | 3426 | ] |
| G [ | 23793 | 2052 | 34810 | 1251 | 40 | 1725 | 382 | 122 | 1444 | 18081 | 24896 | 2528 | 44943 | 34745 | ] |
| T [ | 4423 | 18270 | 6513 | 943 | 325 | 2780 | 17938 | 411 | 37675 | 7335 | 3140 | 30196 | 563 | 4667 | ] |
