Detailed information of deep learning profile BP001205.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001205.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BKT
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.78e-03 -1.05e-03 -4.93e-06 1.24e-01 3.17e-05 9.32e-03 -5.16e-04 -1.77e-05 1.42e-02 -3.22e-03 ]
C [ -5.31e-04 5.71e-04 1.75e-01 2.55e-05 1.24e-01 7.27e-04 1.69e-04 5.60e-05 -1.55e-03 2.26e-02 ]
G [ 5.86e-02 -8.65e-04 1.14e-04 6.79e-05 9.65e-04 7.61e-02 -4.77e-04 1.65e-01 4.30e-03 -4.80e-04 ]
T [ -5.12e-04 5.67e-02 2.19e-05 -1.95e-05 8.18e-04 -7.15e-05 9.80e-02 4.73e-06 -2.83e-03 6.10e-03 ]

Frequency matrix

A [ 8233 2270 51 37776 53 12231 2008 44 13158 3236 ]
C [ 3159 6537 38174 173 32012 4068 858 37 6808 16659 ]
G [ 26097 3409 22 147 3196 21643 1342 37917 13541 6975 ]
T [ 762 26036 5 156 2991 310 34044 254 4744 11383 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001029.1 USF1 ENCSR000BGM HepG2 Homo sapiens
BP001031.1 USF1 ENCSR787CHF K562 Homo sapiens
BP001122.1 USF1 ENCSR248QBT WTC11 Homo sapiens
Showing 3 profiles of page 2 from 2 pages