Detailed information of deep learning profile BP001205.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001205.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BKT
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.10e-03 -2.83e-03 4.73e-06 9.80e-02 -7.15e-05 8.18e-04 -1.95e-05 2.19e-05 5.67e-02 -5.12e-04 ]
C [ -4.80e-04 4.30e-03 1.65e-01 -4.77e-04 7.61e-02 9.65e-04 6.79e-05 1.14e-04 -8.65e-04 5.86e-02 ]
G [ 2.26e-02 -1.55e-03 5.60e-05 1.69e-04 7.27e-04 1.24e-01 2.55e-05 1.75e-01 5.71e-04 -5.31e-04 ]
T [ -3.22e-03 1.42e-02 -1.77e-05 -5.16e-04 9.32e-03 3.17e-05 1.24e-01 -4.93e-06 -1.05e-03 5.78e-03 ]

Frequency matrix

A [ 11383 4744 254 34044 310 2991 156 5 26036 762 ]
C [ 6975 13541 37917 1342 21643 3196 147 22 3409 26097 ]
G [ 16659 6808 37 858 4068 32012 173 38174 6537 3159 ]
T [ 3236 13158 44 2008 12231 53 37776 51 2270 8233 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000844.1 USF1 ENCSR000BIU H1 Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages