Detailed information of deep learning profile BP001208.1

This page shows detailed deep learning-derived predictions and motifs for HOXD13 in HEK293 using a single trained BPNet model.

Model details

Name: HOXD13
Model ID: BP001208.1
Cell line/tissue: HEK293
Class: Homeo domain factors
Family: HOX
Best Match(es): MA0909.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P35453  
Source: ENCSR418XXL
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.55e-04 -2.36e-04 -1.31e-04 2.62e-04 9.66e-03 0.00e+00 1.38e-02 2.23e-02 1.95e-02 4.62e-03 ]
C [ 4.12e-04 5.11e-03 5.93e-03 3.66e-03 -1.88e-06 0.00e+00 -3.31e-06 -1.97e-06 1.30e-06 -4.26e-05 ]
G [ 3.41e-03 2.28e-03 -5.50e-06 -2.72e-05 3.09e-03 0.00e+00 -5.40e-06 0.00e+00 0.00e+00 -1.24e-04 ]
T [ -8.47e-04 -2.69e-04 5.70e-03 5.39e-04 7.39e-06 2.74e-02 3.02e-04 9.65e-06 1.97e-06 -4.28e-04 ]

Frequency matrix

A [ 3062 2742 1689 4718 8798 6 11468 13557 13090 6234 ]
C [ 3030 5249 5634 3953 209 5 123 51 283 2802 ]
G [ 4574 4024 553 1084 3557 0 542 0 93 1638 ]
T [ 3070 1720 5859 3980 1171 13724 1602 127 269 3060 ]