Detailed information of deep learning profile BP001208.1

This page shows detailed deep learning-derived predictions and motifs for HOXD13 in HEK293 using a single trained BPNet model.

Model details

Name: HOXD13
Model ID: BP001208.1
Cell line/tissue: HEK293
Class: Homeo domain factors
Family: HOX
Best Match(es): MA0909.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P35453  
Source: ENCSR418XXL
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.28e-04 1.97e-06 9.65e-06 3.02e-04 2.74e-02 7.39e-06 5.39e-04 5.70e-03 -2.69e-04 -8.47e-04 ]
C [ -1.24e-04 0.00e+00 0.00e+00 -5.40e-06 0.00e+00 3.09e-03 -2.72e-05 -5.50e-06 2.28e-03 3.41e-03 ]
G [ -4.26e-05 1.30e-06 -1.97e-06 -3.31e-06 0.00e+00 -1.88e-06 3.66e-03 5.93e-03 5.11e-03 4.12e-04 ]
T [ 4.62e-03 1.95e-02 2.23e-02 1.38e-02 0.00e+00 9.66e-03 2.62e-04 -1.31e-04 -2.36e-04 -1.55e-04 ]

Frequency matrix

A [ 3060 269 127 1602 13724 1171 3980 5859 1720 3070 ]
C [ 1638 93 0 542 0 3557 1084 553 4024 4574 ]
G [ 2802 283 51 123 5 209 3953 5634 5249 3030 ]
T [ 6234 13090 13557 11468 6 8798 4718 1689 2742 3062 ]