This page shows detailed deep learning-derived predictions and motifs for CTCF in Peyer's patch using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001209.1 |
| Cell line/tissue: | Peyer's patch |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR542SCB |
| Model: | BPNet |
| A [ | -1.29e-03 | -3.34e-04 | 1.88e-02 | -8.52e-04 | -3.29e-03 | 5.42e-02 | -1.49e-04 | 8.95e-03 | -1.59e-03 | -4.00e-04 | -6.98e-04 | -1.70e-03 | 5.55e-03 | -1.87e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.69e-02 | 1.12e-01 | -3.67e-04 | 4.18e-02 | 1.36e-02 | -2.49e-04 | -2.17e-05 | -1.98e-05 | -1.59e-04 | -9.42e-06 | -1.06e-04 | 6.01e-02 | -5.09e-04 | 1.83e-02 | ] |
| G [ | -1.02e-03 | -1.46e-04 | 6.07e-03 | 5.19e-03 | -1.66e-03 | 2.01e-04 | 1.09e-01 | 4.94e-02 | 3.40e-02 | 1.05e-01 | 7.21e-02 | -2.85e-04 | 4.05e-02 | 6.96e-03 | ] |
| T [ | -1.44e-03 | -2.41e-04 | -2.54e-03 | -7.80e-04 | 9.67e-03 | -1.06e-03 | -1.26e-04 | -2.18e-04 | 1.91e-03 | -2.35e-04 | -6.36e-04 | -1.62e-03 | -1.37e-03 | -5.93e-04 | ] |
| A [ | 1571 | 326 | 13678 | 959 | 2890 | 17558 | 145 | 7164 | 952 | 252 | 548 | 2530 | 7627 | 1946 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16961 | 20096 | 822 | 12473 | 9171 | 770 | 58 | 161 | 971 | 141 | 763 | 15899 | 929 | 10459 | ] |
| G [ | 1092 | 114 | 3858 | 6720 | 1790 | 1362 | 20352 | 13130 | 11831 | 20040 | 17836 | 650 | 11153 | 6464 | ] |
| T [ | 1014 | 102 | 2280 | 486 | 6787 | 947 | 83 | 183 | 6883 | 205 | 1491 | 1559 | 929 | 1768 | ] |
