Detailed information of deep learning profile BP001210.1

This page shows detailed deep learning-derived predictions and motifs for NR2C1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C1
Model ID: BP001210.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA1535.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P13056  
Source: ENCSR742IDN
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.91e-03 2.07e-03 1.20e-02 3.71e-06 -1.48e-06 4.78e-05 1.08e-04 2.82e-02 2.50e-03 4.40e-03 6.62e-05 -3.08e-04 ]
C [ 1.84e-03 7.71e-04 9.63e-05 1.48e-04 6.40e-09 -2.83e-06 2.67e-02 1.09e-04 9.07e-04 3.90e-04 -4.33e-05 1.14e-03 ]
G [ -1.39e-04 4.17e-03 4.64e-03 2.49e-02 3.15e-02 1.02e-04 -4.52e-06 2.46e-04 2.82e-05 1.76e-03 6.97e-03 5.33e-03 ]
T [ 9.89e-05 -2.01e-04 -1.28e-05 -6.70e-06 8.79e-05 3.08e-02 4.31e-05 0.00e+00 4.24e-04 -1.12e-04 3.66e-04 3.54e-04 ]

Frequency matrix

A [ 11656 10184 19118 1699 156 108 302 30280 7816 10240 7251 5876 ]
C [ 7683 3770 734 744 25 342 28507 62 7633 5555 5148 6762 ]
G [ 5471 14227 11480 28495 30066 857 1011 1467 11051 11702 13142 12933 ]
T [ 7041 3669 518 912 1604 30544 2031 42 5351 4354 6310 6280 ]

Alternative motif patterns (AMPs)

1 profiles found for the same TF (NR2C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000195.1 NR2C1 ENCSR178DEG K562 Homo sapiens
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