Detailed information of deep learning profile BP001210.1

This page shows detailed deep learning-derived predictions and motifs for NR2C1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C1
Model ID: BP001210.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA1535.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P13056  
Source: ENCSR742IDN
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.54e-04 3.66e-04 -1.12e-04 4.24e-04 0.00e+00 4.31e-05 3.08e-02 8.79e-05 -6.70e-06 -1.28e-05 -2.01e-04 9.89e-05 ]
C [ 5.33e-03 6.97e-03 1.76e-03 2.82e-05 2.46e-04 -4.52e-06 1.02e-04 3.15e-02 2.49e-02 4.64e-03 4.17e-03 -1.39e-04 ]
G [ 1.14e-03 -4.33e-05 3.90e-04 9.07e-04 1.09e-04 2.67e-02 -2.83e-06 6.40e-09 1.48e-04 9.63e-05 7.71e-04 1.84e-03 ]
T [ -3.08e-04 6.62e-05 4.40e-03 2.50e-03 2.82e-02 1.08e-04 4.78e-05 -1.48e-06 3.71e-06 1.20e-02 2.07e-03 3.91e-03 ]

Frequency matrix

A [ 6280 6310 4354 5351 42 2031 30544 1604 912 518 3669 7041 ]
C [ 12933 13142 11702 11051 1467 1011 857 30066 28495 11480 14227 5471 ]
G [ 6762 5148 5555 7633 62 28507 342 25 744 734 3770 7683 ]
T [ 5876 7251 10240 7816 30280 302 108 156 1699 19118 10184 11656 ]

Alternative motif patterns (AMPs)

1 profiles found for the same TF (NR2C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000195.1 NR2C1 ENCSR178DEG K562 Homo sapiens
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