This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001211.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR374PKX |
| Model: | BPNet |
| A [ | -1.62e-03 | -7.07e-04 | 2.96e-02 | -2.42e-03 | -5.57e-03 | 8.43e-02 | -4.86e-04 | 2.32e-02 | -4.19e-03 | -8.73e-04 | -1.57e-03 | -3.75e-03 | 1.15e-02 | -3.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.86e-02 | 1.92e-01 | -8.67e-04 | 7.00e-02 | 1.49e-02 | -1.46e-04 | -5.53e-05 | -6.49e-05 | 5.61e-06 | -7.02e-05 | 9.46e-05 | 1.05e-01 | -8.38e-04 | 3.42e-02 | ] |
| G [ | -2.33e-03 | -3.63e-04 | 7.47e-03 | 1.36e-02 | -2.12e-03 | 5.53e-04 | 1.99e-01 | 7.52e-02 | 5.91e-02 | 1.90e-01 | 1.23e-01 | -7.85e-04 | 6.09e-02 | 1.39e-02 | ] |
| T [ | -3.35e-03 | -6.63e-04 | -5.78e-03 | -2.17e-03 | 2.28e-02 | -2.61e-03 | -3.05e-04 | -6.14e-04 | 1.08e-02 | -5.63e-04 | -1.71e-04 | -3.39e-03 | -3.80e-03 | -1.72e-03 | ] |
| A [ | 3653 | 34 | 26489 | 2109 | 6062 | 31611 | 338 | 15167 | 2030 | 471 | 1075 | 5494 | 15833 | 3860 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29598 | 38193 | 1737 | 21825 | 14720 | 1202 | 65 | 408 | 1489 | 102 | 1648 | 28219 | 2050 | 18530 | ] |
| G [ | 2438 | 20 | 4918 | 13117 | 3134 | 3094 | 37691 | 22266 | 21002 | 37390 | 32315 | 1316 | 18374 | 12002 | ] |
| T [ | 2574 | 16 | 5119 | 1212 | 14347 | 2356 | 169 | 422 | 13743 | 300 | 3225 | 3233 | 2006 | 3871 | ] |
