This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001217.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMV |
| Model: | BPNet |
| A [ | -2.47e-03 | -4.46e-03 | -3.75e-03 | -1.70e-03 | -8.73e-04 | 1.70e-03 | -8.91e-04 | -6.71e-04 | -3.17e-03 | 7.66e-03 | -2.49e-03 | -8.16e-03 | -1.09e-03 | -3.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.28e-02 | 6.32e-02 | 7.71e-04 | 1.09e-01 | 1.57e-01 | 5.16e-02 | 7.95e-02 | 1.59e-01 | 3.70e-03 | 4.06e-04 | 1.97e-02 | 6.32e-03 | 9.71e-05 | -1.52e-05 | ] |
| G [ | 4.18e-02 | 1.81e-03 | 9.13e-02 | 2.40e-03 | 2.11e-04 | 5.31e-04 | 4.14e-05 | 1.05e-04 | 2.76e-04 | 2.14e-02 | 4.74e-02 | 3.08e-03 | 1.53e-01 | 8.24e-02 | ] |
| T [ | -4.17e-03 | 1.43e-03 | -6.34e-03 | -2.18e-03 | -1.25e-03 | -6.85e-03 | 4.59e-03 | -6.37e-04 | 3.68e-02 | -5.72e-03 | -2.33e-03 | 9.80e-03 | -1.65e-03 | -3.23e-03 | ] |
| A [ | 8367 | 5083 | 6665 | 5372 | 1054 | 24091 | 1249 | 783 | 8726 | 21722 | 3081 | 15226 | 427 | 5139 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 20950 | 40148 | 3317 | 63319 | 73107 | 39899 | 51585 | 73472 | 10510 | 10232 | 30494 | 11390 | 545 | 7057 | ] |
| G [ | 39201 | 6192 | 53508 | 4561 | 468 | 4303 | 1152 | 443 | 3623 | 31815 | 36523 | 6254 | 73647 | 56717 | ] |
| T [ | 7212 | 24307 | 12240 | 2478 | 1101 | 7437 | 21743 | 1032 | 52871 | 11961 | 5631 | 42860 | 1111 | 6817 | ] |
