This page shows detailed deep learning-derived predictions and motifs for CTCF in gastrocnemius medialis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001218.1 |
| Cell line/tissue: | gastrocnemius medialis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR594NSU |
| Model: | BPNet |
| A [ | -1.62e-03 | -3.06e-03 | -3.45e-03 | -8.89e-04 | -5.29e-04 | 5.99e-03 | -4.94e-04 | -3.54e-04 | -2.20e-03 | 1.72e-02 | -1.98e-03 | -5.83e-03 | -4.31e-04 | -3.08e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.33e-02 | 5.29e-02 | -6.53e-04 | 1.09e-01 | 1.67e-01 | 5.17e-02 | 6.95e-02 | 1.72e-01 | 7.57e-04 | -2.65e-03 | 1.20e-02 | 7.49e-03 | -2.68e-04 | -1.78e-03 | ] |
| G [ | 2.89e-02 | -6.38e-04 | 8.92e-02 | -2.05e-04 | -5.60e-05 | -3.53e-05 | -1.06e-05 | -3.78e-05 | -1.85e-04 | 1.85e-02 | 6.34e-02 | -4.68e-04 | 1.75e-01 | 9.28e-02 | ] |
| T [ | -3.06e-03 | 7.35e-03 | -2.96e-03 | -1.18e-03 | -7.19e-04 | -3.57e-03 | 1.78e-02 | -3.85e-04 | 7.57e-02 | -5.36e-03 | -1.86e-03 | 2.66e-02 | -5.65e-04 | -1.81e-03 | ] |
| A [ | 2748 | 1392 | 2333 | 2176 | 112 | 11466 | 226 | 123 | 1784 | 10400 | 979 | 4014 | 2 | 1905 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10323 | 16235 | 700 | 28163 | 31072 | 16420 | 18694 | 31007 | 2573 | 3015 | 11214 | 5025 | 11 | 2288 | ] |
| G [ | 15362 | 1369 | 24395 | 631 | 64 | 1749 | 368 | 60 | 1217 | 13196 | 17496 | 1479 | 31415 | 24296 | ] |
| T [ | 3028 | 12465 | 4033 | 491 | 213 | 1826 | 12173 | 271 | 25887 | 4850 | 1772 | 20943 | 33 | 2972 | ] |
