This page shows detailed deep learning-derived predictions and motifs for CTCF in sigmoid colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001221.1 |
| Cell line/tissue: | sigmoid colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR925GDS |
| Model: | BPNet |
| A [ | -5.02e-04 | -1.02e-03 | -8.90e-04 | -4.48e-04 | -1.72e-04 | 2.93e-03 | -1.08e-04 | -8.21e-05 | -7.89e-04 | 5.85e-03 | -6.11e-04 | -1.78e-03 | -1.33e-04 | -1.08e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 4.87e-03 | 2.65e-02 | -3.78e-04 | 4.81e-02 | 7.45e-02 | 2.03e-02 | 3.16e-02 | 7.44e-02 | -3.02e-05 | -1.39e-03 | 3.69e-03 | 4.18e-03 | -7.03e-05 | -8.27e-04 | ] |
| G [ | 1.37e-02 | -3.52e-04 | 4.29e-02 | -2.57e-04 | -2.05e-05 | -6.74e-05 | -4.80e-06 | -2.98e-06 | -1.82e-04 | 8.91e-03 | 2.97e-02 | -3.55e-04 | 8.34e-02 | 4.27e-02 | ] |
| T [ | -1.09e-03 | 6.23e-03 | -7.99e-04 | -4.95e-04 | -2.70e-04 | -1.13e-03 | 9.06e-03 | -1.31e-04 | 3.88e-02 | -2.35e-03 | -6.64e-04 | 1.77e-02 | -1.91e-04 | -8.81e-04 | ] |
| A [ | 1550 | 889 | 1489 | 1462 | 193 | 6626 | 134 | 79 | 917 | 6055 | 474 | 1976 | 74 | 979 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6010 | 9546 | 618 | 15923 | 18171 | 10174 | 11345 | 18422 | 1314 | 1539 | 6079 | 3140 | 56 | 1058 | ] |
| G [ | 9266 | 913 | 14215 | 717 | 112 | 912 | 172 | 53 | 696 | 8243 | 11318 | 677 | 18374 | 15062 | ] |
| T [ | 1881 | 7359 | 2384 | 605 | 231 | 995 | 7056 | 153 | 15781 | 2870 | 835 | 12914 | 203 | 1609 | ] |
