This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001225.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR597TGH |
| Model: | BPNet |
| A [ | -4.77e-04 | 2.01e-03 | -2.29e-03 | -1.92e-03 | -5.04e-04 | 8.34e-04 | 1.42e-04 | -1.27e-04 | -2.14e-03 | -4.48e-03 | -4.91e-03 | 7.49e-03 | -1.24e-03 | -9.01e-04 | 2.91e-02 | -1.41e-03 | -3.54e-03 | 7.96e-02 | -2.42e-04 | 6.38e-03 | -4.71e-03 | -1.49e-03 | -1.91e-03 | -9.39e-04 | 3.27e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -3.14e-03 | 2.08e-03 | 3.02e-02 | 1.32e-02 | 7.12e-03 | 3.63e-03 | 9.03e-04 | -5.80e-04 | 3.71e-03 | 1.51e-02 | 6.38e-03 | -2.49e-03 | 1.11e-01 | 1.77e-01 | -3.80e-04 | 6.09e-02 | 1.51e-02 | -3.21e-04 | -4.56e-06 | -1.41e-04 | -1.58e-04 | -2.64e-04 | 2.29e-03 | 4.82e-02 | 1.73e-03 | ] |
| G [ | -1.21e-03 | -1.97e-03 | -2.97e-03 | -1.60e-03 | -7.21e-04 | -8.68e-04 | 6.03e-05 | -7.39e-04 | 2.15e-04 | -1.95e-03 | 9.04e-03 | 1.49e-02 | -1.45e-03 | -2.73e-04 | 3.53e-03 | 1.20e-02 | -1.92e-03 | 1.70e-03 | 1.75e-01 | 8.82e-02 | 5.38e-02 | 1.23e-01 | 6.72e-02 | 7.67e-04 | 2.96e-02 | ] |
| T [ | 2.66e-02 | 3.01e-03 | -2.71e-04 | 6.55e-05 | -1.67e-03 | -1.22e-03 | 6.83e-04 | 4.13e-03 | 1.91e-03 | 8.80e-03 | -1.90e-03 | -4.15e-03 | -2.12e-03 | -5.99e-04 | -5.38e-03 | -1.81e-03 | 2.44e-02 | -2.23e-03 | -1.92e-04 | -8.05e-04 | 8.23e-04 | -1.46e-03 | -1.02e-03 | -2.57e-03 | -2.59e-03 | ] |
| A [ | 10118 | 13281 | 9784 | 12119 | 14092 | 14884 | 14341 | 14544 | 12332 | 7503 | 11443 | 16834 | 4313 | 601 | 38843 | 3453 | 8173 | 47298 | 193 | 16302 | 4921 | 1835 | 4745 | 11272 | 20101 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8371 | 13554 | 25194 | 20250 | 17765 | 15703 | 14341 | 12537 | 14995 | 18871 | 12467 | 5813 | 46903 | 55175 | 2310 | 32826 | 22547 | 1045 | 27 | 330 | 2287 | 1690 | 5260 | 32579 | 7074 | ] |
| G [ | 11402 | 11929 | 7476 | 8705 | 11538 | 12426 | 11705 | 10850 | 13390 | 7012 | 19008 | 23059 | 2146 | 59 | 5579 | 18079 | 3211 | 4509 | 55589 | 38202 | 32464 | 49767 | 40034 | 5076 | 23037 | ] |
| T [ | 26040 | 17166 | 13478 | 14857 | 12535 | 12918 | 15543 | 18000 | 15214 | 22544 | 13013 | 10226 | 2569 | 96 | 9199 | 1574 | 22000 | 3079 | 122 | 1097 | 16259 | 2639 | 5892 | 7005 | 5718 | ] |
