Detailed information of deep learning profile BP001227.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP001227.1
Cell line/tissue: HepG2
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR853ADA
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.46e-03 -1.56e-03 -2.64e-04 -7.06e-04 3.01e-02 -5.00e-04 1.12e-05 -1.76e-06 5.42e-06 -1.61e-05 3.09e-02 ]
C [ -2.77e-04 8.13e-02 -2.58e-04 1.12e-01 1.79e-03 3.18e-03 2.53e-05 1.84e-01 4.30e-05 1.40e-01 -2.64e-03 ]
G [ 7.86e-02 -1.12e-03 1.03e-01 -7.10e-04 2.43e-03 -4.57e-04 1.81e-01 5.27e-05 1.73e-01 8.65e-05 9.56e-03 ]
T [ -6.99e-04 -5.55e-04 -1.16e-03 -5.29e-04 -2.32e-03 8.72e-02 -3.31e-06 2.42e-05 -5.92e-05 2.25e-03 -3.11e-03 ]

Frequency matrix

A [ 6808 7506 6513 3899 10548 2070 494 82 15 122 16677 ]
C [ 9270 21543 7780 27072 19114 9122 337 44899 34 40466 9258 ]
G [ 24060 10975 26186 9334 10119 7023 44200 31 44934 824 14948 ]
T [ 4979 5094 4639 4813 5337 26903 87 106 135 3706 4235 ]

Other motif patterns

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
Showing 10 profiles of page 1 from 2 pages