This page shows detailed deep learning-derived predictions and motifs for CTCF in testis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001228.1 |
| Cell line/tissue: | testis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR753RME |
| Model: | BPNet |
| A [ | -1.07e-03 | -3.03e-03 | -3.04e-03 | -7.24e-04 | -6.81e-04 | 4.40e-03 | -4.03e-04 | -2.08e-04 | -1.89e-03 | 2.08e-02 | -1.65e-03 | -4.80e-03 | -5.23e-04 | -2.42e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.41e-03 | 4.58e-02 | -3.79e-04 | 9.21e-02 | 1.50e-01 | 4.99e-02 | 6.33e-02 | 1.60e-01 | 4.15e-04 | -2.12e-03 | 1.11e-02 | 5.51e-03 | -2.73e-04 | -1.63e-03 | ] |
| G [ | 2.58e-02 | -1.14e-04 | 7.57e-02 | 7.29e-04 | -9.35e-05 | -3.36e-04 | -1.29e-04 | -7.03e-05 | -3.21e-04 | 1.47e-02 | 5.98e-02 | -2.45e-04 | 1.59e-01 | 8.77e-02 | ] |
| T [ | -2.20e-03 | 9.48e-03 | -1.49e-03 | -1.38e-03 | -7.65e-04 | -3.29e-03 | 1.36e-02 | -3.21e-04 | 7.81e-02 | -4.72e-03 | -1.66e-03 | 2.63e-02 | -7.78e-04 | -1.88e-03 | ] |
| A [ | 3514 | 1927 | 3086 | 2906 | 425 | 11242 | 349 | 39 | 1374 | 12905 | 745 | 3977 | 16 | 1773 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9774 | 15452 | 1453 | 27007 | 31704 | 19089 | 18876 | 32673 | 1925 | 1824 | 10536 | 3865 | 9 | 1442 | ] |
| G [ | 15865 | 2114 | 23072 | 1637 | 181 | 859 | 205 | 12 | 649 | 13258 | 20031 | 964 | 32696 | 26859 | ] |
| T [ | 3638 | 13298 | 5180 | 1242 | 481 | 1601 | 13361 | 67 | 28843 | 4804 | 1479 | 23985 | 70 | 2717 | ] |
